Package: biogas 1.64.9000

biogas: Process Biogas Data and Predict Biogas Production

Functions for calculating biochemical methane potential (BMP) from laboratory measurements and other types of data processing and prediction useful for biogas research. Raw laboratory measurements for diverse methods (volumetric, manometric, gravimetric, gas density) can be processed to calculate BMP. Theoretical maximum BMP or methane or biogas yield can be predicted from various measures of substrate composition. Molar mass and calculated oxygen demand (COD') can be determined from a chemical formula. Measured gas volume can be corrected for water vapor and to standard (or user-defined) temperature and pressure. Gas quantity can be converted between volume, mass, and moles. A function for planning BMP experiments can consider multiple constraints in suggesting substrate or inoculum quantities, and check for problems. Inoculum and substrate mass can be determined for planning BMP experiments. Finally, a set of first-order models can be fit to measured methane production rate or cumulative yield in order to extract estimates of ultimate yield and kinetic constants. See Hafner et al. (2018) <doi:10.1016/j.softx.2018.06.005> for details. OBA is a web application that provides access to some of the package functionality: <https://biotransformers.shinyapps.io/oba1/>. The Standard BMP Methods website documents the calculations in detail: <https://www.dbfz.de/en/BMP>.

Authors:Sasha D. Hafner [aut, cre], Charlotte Rennuit [aut], Camilla Justesen [aut], Nanna Lojborg [aut], Jacob Mortensen [aut], Jonas Ohlsson [aut], Sergi Astals [ctb], Konrad Koch [ctb], Soeren Weinrich [ctb], Jin Mi Triolo [ctb], Ali Heidarzadeh Vazifehkhoran [ctb]

biogas_1.64.9000.tar.gz
biogas_1.64.9000.zip(r-4.7)biogas_1.64.9000.zip(r-4.6)biogas_1.64.9000.zip(r-4.5)
biogas_1.64.9000.tgz(r-4.6-any)biogas_1.64.9000.tgz(r-4.5-any)
biogas_1.64.9000.tar.gz(r-4.7-any)biogas_1.64.9000.tar.gz(r-4.6-any)
biogas_1.64.9000.tgz(r-4.6-emscripten)
manual.pdf |manual.html
DESCRIPTION |NEWS
card.svg |card.png
biogas/json (API)

# Install 'biogas' in R:
install.packages('biogas', repos = c('https://sashahafner.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/sashahafner/biogas/issues

Datasets:
  • comp - Methane Content of Biogas
  • comp2 - Methane Content of Biogas
  • feedSetup - Setup Details for Batch Reactors
  • feedVol - Biogas Volume from Batch Reactors
  • mass - Mass Change of Batch Reactors
  • massw - Mass Change of Batch Reactors
  • s3compl - Methane Content of Biogas from Batch Reactors
  • s3compw - Methane Content of Biogas from Batch Reactors
  • s3lcombo - Biogas Volume and Methane Content from Batch Bottles
  • s3voll - Biogas Volume from Batch Bottles
  • s3volw - Biogas Volume from Batch Reactors
  • setup - Setup Details for Batch Reactors
  • setup2 - Setup Details for Some Batch Reactors
  • sludgeTwoBiogas - Headspace Pressure, Mass measurements, and Methane and Carbondioxid Content from Batch Bottles
  • sludgeTwoSetup - Setup Details for Batch Reactors
  • strawComp - Methane Content of Biogas
  • strawMass - Mass Change of Batch Reactors
  • strawPressure - Headspace Pressure in Batch Reactors
  • strawSetup - Setup Details for Batch Reactors
  • UQGDBiogas - Biogas Volume and Mass Loss from BMP bottles
  • UQGDSetup - BMP Bottle Setup Information
  • UQGravBiogas - Mass Loss and Biogas Composition from BMP bottles
  • UQGravSetup - BMP Bottle Setup Information
  • vol - Biogas Volume from Batch Reactors
  • vol2 - Biogas Volume from Batch Reactors

On CRAN:

Conda:

5.28 score 15 stars 63 scripts 350 downloads 16 exports 0 dependencies

Last updated from:62f38db5ff. Checks:8 ERROR, 1 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64ERROR131
source / vignettesERROR179
linux-release-x86_64ERROR125
macos-release-arm64ERROR120
macos-oldrel-arm64ERROR129
windows-develERROR93
windows-releaseERROR67
windows-oldrelERROR68
wasm-releaseOK91

Exports:calcBgGDcalcBgGravcalcBgMancalcBgVolcalcCODcumBgfitFOMinterpmass2volmolMassplanBMPpredBgstdVolsummBgvol2massvol2mol

Dependencies:

Readme and manuals

Help Manual

Help pageTopics
Calculate Biogas Production from Gas Density Data (GD-BMP)calcBgGD
Calculate Biogas Production from Gravimetric DatacalcBgGrav
Calculate Cumulative Biogas Production from Pressure DatacalcBgMan
Calculate Cumulative Biogas Production from Volumetric DatacalcBgVol
Calculate Oxygen DemandcalcCOD
Methane Content of Biogascomp
Methane Content of Biogascomp2
Calculate Cumulative Biogas ProductioncumBg
Setup Details for Batch ReactorsfeedSetup
Biogas Volume from Batch ReactorsfeedVol
Fit a First-Order Model to Biogas or Other DatafitFOM
Interpolate Biogas Composition or Cumulative Productioninterp
Mass Change of Batch Reactorsmass
Calculate Biogas Production Gravimetricallymass2vol
Mass Change of Batch Reactorsmassw
Calculate Molar Mass of CompoundmolMass
Claculate Inoculum and Substrate Mass for BMP ExperimentsplanBMP
Predict Biogas ProductionpredBg
Methane Content of Biogas from Batch Reactorss3compl
Methane Content of Biogas from Batch Reactorss3compw
Biogas Volume and Methane Content from Batch Bottless3lcombo
Biogas Volume from Batch Bottless3voll
Biogas Volume from Batch Reactorss3volw
Setup Details for Batch Reactorssetup
Setup Details for Some Batch Reactorssetup2
Headspace Pressure, Mass measurements, and Methane and Carbondioxid Content from Batch BottlessludgeTwoBiogas
Setup Details for Batch ReactorssludgeTwoSetup
Correct Gas Volume to 'Standard' ConditionsstdVol
Methane Content of BiogasstrawComp
Mass Change of Batch ReactorsstrawMass
Headspace Pressure in Batch ReactorsstrawPressure
Setup Details for Batch ReactorsstrawSetup
Summarise and Normalise Cumulative Methane ProductionsummBg
Biogas Volume and Mass Loss from BMP bottlesUQGDBiogas
BMP Bottle Setup InformationUQGDSetup
Mass Loss and Biogas Composition from BMP bottlesUQGravBiogas
BMP Bottle Setup InformationUQGravSetup
Biogas Volume from Batch Reactorsvol
Biogas Volume from Batch Reactorsvol2
Calculate Mass of Biogasvol2mass
Calculate Moles of a Gasvol2mol